potassium calcium-activated channel subfamily M alpha 1 [Source:VGNC Symbol;Acc:VGNC:57522]
Chromosome 10: 78,132,313-78,897,850 reverse strand.
Pan_tro_3.0:CM000324.3
This gene has 10 transcripts (splice variants), 300 orthologues and 3 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000089201.1 | KCNMA1-201 | 3861 | 1286aa | ENSPTRP00000061420.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3R9W8 A0A663DGL7 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000092178.1 | KCNMA1-202 | 3735 | 1244aa | ENSPTRP00000080303.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3STF6 A0A663DBX3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000079050.1 | KCNMA1-205 | 3723 | 1240aa | ENSPTRP00000062295.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RCD2 A0A663D9R5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000085034.1 | KCNMA1-208 | 3714 | 1237aa | ENSPTRP00000076425.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SHR2 A0A663D8L1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000078293.1 | KCNMA1-203 | 3711 | 1236aa | ENSPTRP00000088033.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TFJ3 A0A663DA64 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000088706.1 | KCNMA1-204 | 3699 | 1232aa | ENSPTRP00000073249.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3S9S2 A0A663DDU6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000090960.1 | KCNMA1-209 | 3654 | 1217aa | ENSPTRP00000068743.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RVL5 A0A663DDU4 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000082426.1 | KCNMA1-206 | 3633 | 1210aa | ENSPTRP00000079706.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SRQ8 A0A663DAQ3 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000101282.1 | KCNMA1-210 | 3618 | 1205aa | ENSPTRP00000081012.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2J8NU10 A0A663D9V2 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000083993.1 | KCNMA1-207 | 3381 | 1126aa | ENSPTRP00000062984.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RE88 A0A663DB61 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
