Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC169 ENSPTRG00000046000

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Description

coiled-coil domain containing 169 [Source:VGNC Symbol;Acc:VGNC:57484]

Location

Chromosome 13: 20,985,726-21,056,473 reverse strand.

Pan_tro_3.0:CM000327.3

About this gene

This gene has 4 transcripts (splice variants) and 67 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000086922.1	CCDC169-201	1048	241aa	ENSPTRP00000093726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TWV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000107208.1	CCDC169-203	929	214aa	ENSPTRP00000076965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJA0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000079885.1	CCDC169-202	928	141aa	ENSPTRP00000073613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S9A0	-
ENSPTRT00000111389.1	CCDC169-204	297	98aa	ENSPTRP00000084191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T4N8	-

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Summary

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