Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN8 ENSPTRG00000043346

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Description

calpain 8 [Source:VGNC Symbol;Acc:VGNC:57562]

Location

Chromosome 1: 202,691,909-202,765,510 reverse strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 3 transcripts (splice variants), 149 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000099402.1	CAPN8-201	2421	703aa	ENSPTRP00000088678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3THH8 A0A6D2W9U1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000080535.1	CAPN8-203	1188	395aa	ENSPTRP00000087332.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TEP8	-
ENSPTRT00000108651.1	CAPN8-202	1146	381aa	ENSPTRP00000077993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SM37 A0A6D2W8K4	-

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Summary

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