Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SOX1 ENSPTRG00000040942

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Description

SRY-box transcription factor 1 [Source:VGNC Symbol;Acc:VGNC:57491]

Location

Chromosome 13: 98,022,247-98,023,422 forward strand.

Pan_tro_3.0:CM000327.3

About this gene

This gene has 1 transcript (splice variant), 184 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000072883.2	SOX1-201	1176	391aa	ENSPTRP00000061108.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W530 H2RHV2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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