Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SLC26A6 ENSPTRG00000038807

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Description

solute carrier family 26 member 6 [Source:VGNC Symbol;Acc:VGNC:8002]

Location

Chromosome 3: 49,673,808-49,684,409 reverse strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 5 transcripts (splice variants), 344 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000027872.5	SLC26A6-203	2286	761aa	ENSPTRP00000025707.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QMJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000096991.1	SLC26A6-201	3485	759aa	ENSPTRP00000085418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8A6 A0A6D2XXY3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000089472.1	SLC26A6-204	2229	742aa	ENSPTRP00000080031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SSP6	-
ENSPTRT00000106728.1	SLC26A6-202	2172	723aa	ENSPTRP00000072058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5D9 A0A6D2WIW9	-
ENSPTRT00000079932.1	SLC26A6-205	1980	659aa	ENSPTRP00000090731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TP57	-

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Summary

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