Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SOX4 ENSPTRG00000029832

.

Description

SRY-box transcription factor 4 [Source:VGNC Symbol;Acc:VGNC:3708]

Location

Chromosome 6: 21,839,445-21,840,869 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 1 transcript (splice variant), 180 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000057630.4	SOX4-201	1425	474aa	ENSPTRP00000050537.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XBP8 H2R7L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.