Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TPRX1 ENSPTRG00000028949

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Description

tetrapeptide repeat homeobox 1 [Source:VGNC Symbol;Acc:VGNC:13653]

Location

Chromosome 19: 49,940,935-49,958,635 reverse strand.

Pan_tro_3.0:CM000333.3

About this gene

This gene has 2 transcripts (splice variants), 9 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000055966.3	TPRX1-201	1533	510aa	ENSPTRP00000048581.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R5Y2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000097744.1	TPRX1-202	1134	377aa	ENSPTRP00000086230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TAE3	-

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Summary

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