Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPN1 ENSPTRG00000023575

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Description

protein tyrosine phosphatase non-receptor type 1 [Source:VGNC Symbol;Acc:VGNC:9943]

Location

Chromosome 20: 52,284,333-52,359,273 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 1 transcript (splice variant), 205 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000043013.4	PTPN1-201	3880	435aa	ENSPTRP00000043532.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WTL2 H2R283	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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