Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ATG4A ENSPTRG00000022170

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Description

autophagy related 4A cysteine peptidase [Source:VGNC Symbol;Acc:VGNC:7792]

Location

Chromosome X: 107,691,246-107,754,564 forward strand.

Pan_tro_3.0:CM000336.3

About this gene

This gene has 4 transcripts (splice variants), 160 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000041282.4	ATG4A-201	1860	398aa	ENSPTRP00000038132.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XCX6 G2HGQ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000082063.1	ATG4A-203	1080	359aa	ENSPTRP00000061449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RAF0	-
ENSPTRT00000094078.1	ATG4A-202	1011	336aa	ENSPTRP00000066230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RNL2 A0A6D2Y219	-
ENSPTRT00000105035.1	ATG4A-204	699	232aa	ENSPTRP00000070354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S038	-

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Summary

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