Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TSC22D3 ENSPTRG00000022164

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Description

TSC22 domain family member 3 [Source:VGNC Symbol;Acc:VGNC:11610]

Location

Chromosome X: 107,305,407-107,369,506 reverse strand.

Pan_tro_3.0:CM000336.3

About this gene

This gene has 4 transcripts (splice variants), 202 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000041273.5	TSC22D3-201	2334	200aa	ENSPTRP00000038123.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y9A1 H2QYZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000085058.1	TSC22D3-202	2013	134aa	ENSPTRP00000085759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y1G3 K7CR18	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000082027.1	TSC22D3-203	528	175aa	ENSPTRP00000089129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TIS7	-
ENSPTRT00000096197.1	TSC22D3-204	333	110aa	ENSPTRP00000087600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TFG2 A0A6D2Y7K3	-

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Summary

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