Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GLIS3 ENSPTRG00000020738

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Description

GLIS family zinc finger 3 [Source:VGNC Symbol;Acc:VGNC:13883]

Location

Chromosome 9: 3,832,133-4,307,083 reverse strand.

Pan_tro_3.0:CM000323.3

About this gene

This gene has 3 transcripts (splice variants), 200 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000038379.6	GLIS3-201	2891	930aa	ENSPTRP00000035479.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XMP3 K7C919	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000108567.1	GLIS3-203	2729	876aa	ENSPTRP00000066272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RNP2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000077887.1	GLIS3-202	2466	821aa	ENSPTRP00000067557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RS80	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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