Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL14A1 ENSPTRG00000020539

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Description

collagen type XIV alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:10673]

Location

Chromosome 8: 122,381,347-122,627,741 forward strand.

Pan_tro_3.0:CM000322.4

About this gene

This gene has 4 transcripts (splice variants), 212 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000091086.1	COL14A1-202	8015	1796aa	ENSPTRP00000071701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S4E5 A0A6D2X9J1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000038001.3	COL14A1-201	5969	1780aa	ENSPTRP00000035127.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WEE9 H2QWM9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000079925.1	COL14A1-204	5139	1712aa	ENSPTRP00000070593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S1Y3	-
ENSPTRT00000097331.1	COL14A1-203	1605	534aa	ENSPTRP00000074999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PNG5 A0A6D2XDB2	-

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Summary

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