Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZNF394 ENSPTRG00000019456

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Description

zinc finger protein 394 [Source:VGNC Symbol;Acc:VGNC:4575]

Location

Chromosome 7: 102,451,366-102,458,674 reverse strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 3 transcripts (splice variants), 85 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000105889.1	ZNF394-202	1707	568aa	ENSPTRP00000073159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S9I2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000036020.5	ZNF394-201	2245	561aa	ENSPTRP00000033294.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VTD9 H2QV07	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000093801.1	ZNF394-203	489	162aa	ENSPTRP00000090765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TNE7 A0A6D2XA44	-

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Summary

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