Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: GTF2I ENSPTRG00000019293

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Description

ral transcription factor IIi [Source:VGNC Symbol;Acc:VGNC:8687]

Location

Chromosome 7: 74,508,681-74,615,162 reverse strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 5 transcripts (splice variants), 126 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000035694.5	GTF2I-201	5264	998aa	ENSPTRP00000032997.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VV99 H2QUR5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000095365.1	GTF2I-202	5204	978aa	ENSPTRP00000081163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WQR1 K7CPW9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000079338.1	GTF2I-203	5201	977aa	ENSPTRP00000071486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XMG7 K7BBK4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000089434.1	GTF2I-204	2697	898aa	ENSPTRP00000083491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TVU8	-
ENSPTRT00000081307.1	GTF2I-205	477	158aa	ENSPTRP00000063908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RHQ2	-

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Summary

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