Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: GARS1 ENSPTRG00000019042

.

Description

glycyl-tRNA synthetase 1 [Source:VGNC Symbol;Acc:VGNC:4365]

Gene Synonyms

GARS

Location

Chromosome 7: 29,741,470-29,790,875 forward strand.

Pan_tro_3.0:CM000321.4

About this gene

This gene has 3 transcripts (splice variants), 230 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000035197.7	GARS1-201	2339	739aa	ENSPTRP00000048086.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6R8Y9 H2R5E9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000089447.1	GARS1-203	2103	700aa	ENSPTRP00000084629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T5W0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000106855.1	GARS1-202	240	79aa	ENSPTRP00000074711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8KLA8 A0A5S6RC43	-

.

Summary

.

.