Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PTPRK ENSPTRG00000018587

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Description

protein tyrosine phosphatase receptor type K [Source:VGNC Symbol;Acc:VGNC:11196]

Location

Chromosome 6: 131,816,525-132,374,495 reverse strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 7 transcripts (splice variants), 208 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000095668.1	PTPRK-205	4419	1472aa	ENSPTRP00000078946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SQY6 A0A6D2X7U8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000034323.7	PTPRK-201	5677	1410aa	ENSPTRP00000031727.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QTQ3	-
ENSPTRT00000108749.1	PTPRK-206	4377	1458aa	ENSPTRP00000077973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SM14 A0A6D2W8C7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000083418.1	PTPRK-203	4368	1455aa	ENSPTRP00000074110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SAP1	-
ENSPTRT00000099676.1	PTPRK-204	4293	1430aa	ENSPTRP00000087454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TDY7	-
ENSPTRT00000093818.1	PTPRK-202	4164	1387aa	ENSPTRP00000089645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TK45	-
ENSPTRT00000086489.1	PTPRK-207	2421	806aa	ENSPTRP00000083252.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T211	-

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Summary

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