Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCN6 ENSPTRG00000018512

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Description

cellular communication network factor 6 [Source:VGNC Symbol;Acc:VGNC:12745]

Gene Synonyms

WISP3

Location

Chromosome 6: 115,677,287-115,693,037 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 4 transcripts (splice variants), 211 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000104179.1	CCN6-201	1600	372aa	ENSPTRP00000078308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SN14 A0A6D2W1I3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000081584.1	CCN6-203	1056	351aa	ENSPTRP00000064248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RHY5	-
ENSPTRT00000078813.1	CCN6-204	996	331aa	ENSPTRP00000086117.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TA62	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000107082.1	CCN6-202	762	253aa	ENSPTRP00000083722.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T3A1	-

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Summary

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