Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TFAP2B ENSPTRG00000018269

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Description

transcription factor AP-2 beta [Source:VGNC Symbol;Acc:VGNC:13037]

Location

Chromosome 6: 51,381,775-51,410,235 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 4 transcripts (splice variants), 196 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000107849.1	TFAP2B-202	1670	467aa	ENSPTRP00000077583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000106066.1	TFAP2B-204	6389	442aa	ENSPTRP00000064131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RHG8	-
ENSPTRT00000033774.3	TFAP2B-201	5437	460aa	ENSPTRP00000031214.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VUF6 H2QT62	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000104045.1	TFAP2B-203	1365	454aa	ENSPTRP00000064889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RJM6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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