Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
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External references
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ID History
- Gene history

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Gene: TAF8 ENSPTRG00000018165

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Description

TATA-box binding protein associated factor 8 [Source:VGNC Symbol;Acc:VGNC:3721]

Location

Chromosome 6: 42,504,767-42,549,815 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 3 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000095230.1	TAF8-202	1017	338aa	ENSPTRP00000088250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8NZV4 A0A6D2XM03	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000033587.7	TAF8-201	4465	310aa	ENSPTRP00000031037.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WPT0 H2QT00	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000085375.1	TAF8-203	936	311aa	ENSPTRP00000092507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TU52 A0A6D2X078	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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