Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ZKSCAN4 ENSPTRG00000017871

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Description

zinc finger with KRAB and SCAN domains 4 [Source:VGNC Symbol;Acc:VGNC:7943]

Location

Chromosome 6: 28,470,269-28,482,422 reverse strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 3 transcripts (splice variants), 116 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000107470.1	ZKSCAN4-201	6916	546aa	ENSPTRP00000071761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S4K0 A0A6D2W342	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000107922.1	ZKSCAN4-203	1626	541aa	ENSPTRP00000089238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TJ32	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000032987.3	ZKSCAN4-202	1128	375aa	ENSPTRP00000030472.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QSJ8	-

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Summary

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