Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: JARID2 ENSPTRG00000017743

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Description

jumonji and AT-rich interaction domain containing 2 [Source:VGNC Symbol;Acc:VGNC:3257]

Location

Chromosome 6: 15,400,792-15,681,102 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 4 transcripts (splice variants), 218 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000076552.1	JARID2-201	4624	1246aa	ENSPTRP00000068115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RU26 A0A6D2XLF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000090617.1	JARID2-204	4992	1074aa	ENSPTRP00000079664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SRS8 A0A6D2VX97	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000032790.3	JARID2-202	3732	1243aa	ENSPTRP00000050563.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R7M3	-
ENSPTRT00000109501.1	JARID2-203	3702	1233aa	ENSPTRP00000091704.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TR21	-

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Summary

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