Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TFAP2A ENSPTRG00000017714

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Description

transcription factor AP-2 alpha [Source:VGNC Symbol;Acc:VGNC:13036]

Location

Chromosome 6: 10,479,118-10,501,892 reverse strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 6 transcripts (splice variants), 202 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000108776.1	TFAP2A-202	3215	439aa	ENSPTRP00000087495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TE14 A0A6D2XDG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000095580.1	TFAP2A-201	3840	431aa	ENSPTRP00000093005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUP7 A0A6D2WKC6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000011439.5	TFAP2A-203	1302	433aa	ENSPTRP00000010583.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XYZ1 H2Q848	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000104715.1	TFAP2A-204	987	328aa	ENSPTRP00000073182.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S840 A0A6D2X8D5	-
ENSPTRT00000092427.1	TFAP2A-205	945	314aa	ENSPTRP00000089790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TKK6	-
ENSPTRT00000104565.1	TFAP2A-206	366	121aa	ENSPTRP00000076513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SJ50 A0A6D2WL66	-

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Summary

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