Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SSR1 ENSPTRG00000017698

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Description

signal sequence receptor subunit 1 [Source:VGNC Symbol;Acc:VGNC:12704]

Location

Chromosome 6: 7,309,069-7,352,359 reverse strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 4 transcripts (splice variants) and 237 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000092657.1	SSR1-201	897	298aa	ENSPTRP00000077606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKR4 A0A6D2WPM2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000100716.1	SSR1-202	3360	291aa	ENSPTRP00000085019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T701 A0A6D2YBL7	-
ENSPTRT00000032707.5	SSR1-203	1049	286aa	ENSPTRP00000030217.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X0K4 K7ATD7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000100559.1	SSR1-204	798	265aa	ENSPTRP00000070216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RZR8	-

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Summary

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