Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CAMK2A ENSPTRG00000017414

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Description

calcium/calmodulin dependent protein kinase II alpha [Source:VGNC Symbol;Acc:VGNC:54157]

Location

Chromosome 5: 150,417,674-150,488,620 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 4 transcripts (splice variants), 166 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000085386.1	CAMK2A-201	5340	489aa	ENSPTRP00000080192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3STB7 A0A6D2XW21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000085735.1	CAMK2A-202	5307	478aa	ENSPTRP00000068421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RUN1 A0A6D2XLG5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000079535.1	CAMK2A-204	1449	482aa	ENSPTRP00000078702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SNX6	-
ENSPTRT00000032212.6	CAMK2A-203	1422	473aa	ENSPTRP00000029757.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QRT0	-

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Summary

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