Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: NR3C1 ENSPTRG00000017363

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Description

nuclear receptor subfamily 3 group C member 1 [Source:VGNC Symbol;Acc:VGNC:4104]

Location

Chromosome 5: 143,339,742-143,496,306 reverse strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 5 transcripts (splice variants), 279 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000032126.4	NR3C1-202	6813	778aa	ENSPTRP00000029679.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QRP6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000104418.1	NR3C1-201	7324	777aa	ENSPTRP00000077422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DQB4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000094433.1	NR3C1-203	2256	751aa	ENSPTRP00000078342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SMV5	-
ENSPTRT00000103688.1	NR3C1-204	1989	662aa	ENSPTRP00000062723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RDH6	-
ENSPTRT00000093561.1	NR3C1-205	405	134aa	ENSPTRP00000076054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SGN7	-

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Summary

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