Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCDHA2 ENSPTRG00000017328

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Description

protocadherin alpha 2 [Source:NCBI gene (formerly Entrezgene);Acc:100034708]

Location

Chromosome 5: 140,816,964-141,042,778 forward strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 10 transcripts (splice variants), 231 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000032064.5	PCDHA2-210	5985	1007aa	ENSPTRP00000029626.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QRN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000032060.4	PCDHA2-209	5474	963aa	ENSPTRP00000029623.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K6HNA6	-
ENSPTRT00000064674.3	PCDHA2-201	2853	950aa	ENSPTRP00000056235.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K6I246	-
ENSPTRT00000055457.5	PCDHA2-203	2853	950aa	ENSPTRP00000047965.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R5A5	-
ENSPTRT00000055455.5	PCDHA2-204	2853	950aa	ENSPTRP00000047963.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5DRE6	-
ENSPTRT00000055453.5	PCDHA2-205	2853	950aa	ENSPTRP00000047961.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5DRE4	-
ENSPTRT00000064777.3	PCDHA2-206	2853	950aa	ENSPTRP00000056340.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5DRE3	-
ENSPTRT00000064609.3	PCDHA2-208	2853	950aa	ENSPTRP00000080056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SSS5	-
ENSPTRT00000055454.5	PCDHA2-207	2850	949aa	ENSPTRP00000047962.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R5A3	-
ENSPTRT00000066652.3	PCDHA2-202	2847	948aa	ENSPTRP00000058232.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5DRF0	-

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Summary

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