Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TCF7 ENSPTRG00000017236

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Description

transcription factor 7 [Source:VGNC Symbol;Acc:VGNC:53274]

Location

Chromosome 5: 134,053,156-134,086,617 forward strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 4 transcripts (splice variants), 202 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000084000.1	TCF7-202	3335	481aa	ENSPTRP00000081399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWP2 A0A6D2XPE4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000031913.5	TCF7-203	3262	384aa	ENSPTRP00000029488.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XDW9 K7D5L3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000104554.1	TCF7-201	1461	269aa	ENSPTRP00000077617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SL17 A0A6D2Y9P7	-
ENSPTRT00000109280.1	TCF7-204	1248	415aa	ENSPTRP00000082628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T199	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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