Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HMGCS1 ENSPTRG00000016845

.

Description

3-hydroxy-3-methylglutaryl-CoA synthase 1 [Source:VGNC Symbol;Acc:VGNC:4035]

Location

Chromosome 5: 70,871,042-70,895,886 forward strand.

Pan_tro_3.0:CM000319.3

About this gene

This gene has 2 transcripts (splice variants), 205 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000031255.6	HMGCS1-201	3550	601aa	ENSPTRP00000028865.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QQU5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000090522.1	HMGCS1-202	3553	520aa	ENSPTRP00000092567.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TUA8 A0A6D2XV98	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.