Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ACSL1 ENSPTRG00000016644

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Description

acyl-CoA synthetase long chain family member 1 [Source:VGNC Symbol;Acc:VGNC:550]

Location

Chromosome 4: 189,073,955-189,145,454 reverse strand.

Pan_tro_3.0:CM000318.3

About this gene

This gene has 5 transcripts (splice variants), 251 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000030902.5	ACSL1-201	3916	698aa	ENSPTRP00000028542.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QQI4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000095490.1	ACSL1-202	2430	527aa	ENSPTRP00000093304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TVP9	-
ENSPTRT00000090702.1	ACSL1-203	2406	698aa	ENSPTRP00000080214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3STD5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000105962.1	ACSL1-204	1995	664aa	ENSPTRP00000076158.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SGL5	-
ENSPTRT00000093433.1	ACSL1-205	381	126aa	ENSPTRP00000064462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RIF9 A0A6D2YCP4	-

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Summary

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