Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HPGD ENSPTRG00000016606

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Description

15-hydroxyprostaglandin dehydrogenase [Source:VGNC Symbol;Acc:VGNC:48903]

Location

Chromosome 4: 178,738,409-178,771,485 reverse strand.

Pan_tro_3.0:CM000318.3

About this gene

This gene has 6 transcripts (splice variants) and 205 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000030853.5	HPGD-201	3242	266aa	ENSPTRP00000028493.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XEJ3 H2QQG0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000087125.1	HPGD-202	597	198aa	ENSPTRP00000072409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5V0 A0A6D2XCJ2	-
ENSPTRT00000078903.1	HPGD-203	537	178aa	ENSPTRP00000078193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SMP3 A0A6D2YBW4	-
ENSPTRT00000102182.1	HPGD-205	531	176aa	ENSPTRP00000067136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RR24 A0A6D2W7W4	-
ENSPTRT00000088326.1	HPGD-204	432	143aa	ENSPTRP00000089981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TL59 A0A6D2WMF5	-
ENSPTRT00000102368.1	HPGD-206	264	87aa	ENSPTRP00000093007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TVI7 A0A6D2VXQ5	-

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Summary

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