Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HOPX ENSPTRG00000016084

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Description

HOP homeobox [Source:VGNC Symbol;Acc:VGNC:57065]

Location

Chromosome 4: 73,903,310-73,936,944 forward strand.

Pan_tro_3.0:CM000318.3

About this gene

This gene has 3 transcripts (splice variants) and 165 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000109370.1	HOPX-202	339	112aa	ENSPTRP00000065973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RMQ1 A0A6D2WEE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000098292.1	HOPX-203	2298	73aa	ENSPTRP00000069416.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PES5 A0A6D2WXH7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000029975.6	HOPX-201	1529	91aa	ENSPTRP00000027663.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WX44 H2QPI5	-

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Summary

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