Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HPS3 ENSPTRG00000015512

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Description

HPS3 biosis of lysosomal organelles complex 2 subunit 1 [Source:VGNC Symbol;Acc:VGNC:8838]

Location

Chromosome 3: 152,619,017-152,663,220 forward strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 3 transcripts (splice variants) and 202 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000028945.2	HPS3-202	4114	1004aa	ENSPTRP00000026709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WA73 H2QNJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000077843.1	HPS3-203	3650	935aa	ENSPTRP00000073841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBH3	-
ENSPTRT00000106745.1	HPS3-201	3624	839aa	ENSPTRP00000081249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SWC1 A0A6D2WYA9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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