Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TFDP2 ENSPTRG00000015479

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Description

transcription factor Dp-2 [Source:VGNC Symbol;Acc:VGNC:9700]

Location

Chromosome 3: 145,392,949-145,591,166 reverse strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 6 transcripts (splice variants), 154 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000077525.1	TFDP2-203	1344	447aa	ENSPTRP00000072222.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S6N6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000028879.6	TFDP2-202	1810	446aa	ENSPTRP00000026651.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WDI7 K7BZM2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000087664.1	TFDP2-204	1409	385aa	ENSPTRP00000066462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RP66 A0A6D2XXI2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000109853.1	TFDP2-201	1372	386aa	ENSPTRP00000063669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8P384 A0A6D2Y9K1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000102755.1	TFDP2-206	1257	418aa	ENSPTRP00000085623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8V4 A0A6D2WNR5	-
ENSPTRT00000104692.1	TFDP2-205	1224	349aa	ENSPTRP00000093062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TVN5 A0A6D2W5Q5	-

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Summary

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