Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: NR1D2 ENSPTRG00000014696

.

Description

nuclear receptor subfamily 1 group D member 2 [Source:VGNC Symbol;Acc:VGNC:7078]

Location

Chromosome 3: 24,502,315-24,537,587 forward strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 4 transcripts (splice variants), 473 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000091168.1	NR1D2-202	1743	580aa	ENSPTRP00000072046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S658	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000027488.4	NR1D2-201	5254	579aa	ENSPTRP00000025347.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W6B2 H2QM71	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000083979.1	NR1D2-203	1230	409aa	ENSPTRP00000075087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SF19	-
ENSPTRT00000080734.1	NR1D2-204	312	103aa	ENSPTRP00000089199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TIZ6	-

.

Summary

.

.