Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: HACL1 ENSPTRG00000014667

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Description

2-hydroxyacyl-CoA lyase 1 [Source:VGNC Symbol;Acc:VGNC:11408]

Location

Chromosome 3: 15,940,004-15,980,606 reverse strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 6 transcripts (splice variants), 206 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000027443.5	HACL1-201	1868	578aa	ENSPTRP00000025304.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2W0Q2 H2QM50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000105496.1	HACL1-202	1656	551aa	ENSPTRP00000085585.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8K8 A0A6D2WMN6	-
ENSPTRT00000098238.1	HACL1-203	1557	518aa	ENSPTRP00000080782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SUY8 A0A6D2WCE0	-
ENSPTRT00000111204.1	HACL1-204	1491	496aa	ENSPTRP00000073919.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SA59 A0A6D2Y527	-
ENSPTRT00000104153.1	HACL1-205	1014	337aa	ENSPTRP00000078238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SMT5 A0A6D2Y3Y1	-
ENSPTRT00000092383.1	HACL1-206	360	119aa	ENSPTRP00000078758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8NP42 A0A6D2XHY0	-

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Summary

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