Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LMCD1 ENSPTRG00000014579

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Description

LIM and cysteine rich domains 1 [Source:VGNC Symbol;Acc:VGNC:1861]

Location

Chromosome 3: 8,732,161-8,798,189 forward strand.

Pan_tro_3.0:CM000317.3

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000027262.6	LMCD1-201	1325	365aa	ENSPTRP00000025133.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QM00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000080014.1	LMCD1-203	762	253aa	ENSPTRP00000061426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3R9X9	-
ENSPTRT00000086145.1	LMCD1-202	744	247aa	ENSPTRP00000093068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TV63 A0A6D2W6V6	-

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Summary

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