Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC117 ENSPTRG00000014209

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Description

coiled-coil domain containing 117 [Source:VGNC Symbol;Acc:VGNC:5241]

Location

Chromosome 22: 15,314,313-15,330,622 forward strand.

Pan_tro_3.0:CM000335.3

About this gene

This gene has 3 transcripts (splice variants) and 185 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000026544.4	CCDC117-201	3993	279aa	ENSPTRP00000024462.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2X8Y7 H2QLF3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000091292.1	CCDC117-202	3939	261aa	ENSPTRP00000064949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RJT4 A0A6D2Y950	-
ENSPTRT00000103825.1	CCDC117-203	615	204aa	ENSPTRP00000064839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RJM3 A0A6D2WVF2	-

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Summary

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