Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PKNOX1 ENSPTRG00000013950

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Description

PBX/knotted 1 homeobox 1 [Source:VGNC Symbol;Acc:VGNC:14815]

Location

Chromosome 21: 29,517,621-29,583,150 forward strand.

Pan_tro_3.0:CM004190.1

About this gene

This gene has 2 transcripts (splice variants), 238 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000098280.1	PKNOX1-201	5006	436aa	ENSPTRP00000071909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XJU7 H2RAH8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000060550.4	PKNOX1-202	1311	436aa	ENSPTRP00000053933.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XJU7 H2RAH8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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