Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GATA5 ENSPTRG00000013711

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Description

GATA binding protein 5 [Source:VGNC Symbol;Acc:VGNC:6110]

Location

Chromosome 20: 64,564,454-64,578,359 reverse strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 2 transcripts (splice variants), 202 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000079838.1	GATA5-201	4490	397aa	ENSPTRP00000074867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XK53 H2QKQ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000025574.3	GATA5-202	4103	397aa	ENSPTRP00000023606.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XK53 H2QKQ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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