CCCTC-binding factor like [Source:VGNC Symbol;Acc:VGNC:14426]
Chromosome 20: 59,485,590-59,515,450 reverse strand.
Pan_tro_3.0:CM000334.4
This gene has 8 transcripts (splice variants), 396 orthologues and 42 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSPTRT00000025459.6 | CTCFL-201 | 2103 | 700aa | ENSPTRP00000023498.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A6D2XH96 H2QKN0 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| ENSPTRT00000088525.1 | CTCFL-203 | 4084 | 613aa | ENSPTRP00000088323.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3TGH3 A0A6D2XE72 | - |
| ENSPTRT00000087582.1 | CTCFL-202 | 3778 | 663aa | ENSPTRP00000063146.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2J8JCD6 A0A6D2WP24 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000097598.1 | CTCFL-204 | 2247 | 461aa | ENSPTRP00000074044.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SAI1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000078438.1 | CTCFL-205 | 2001 | 666aa | ENSPTRP00000068546.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RV93 A0A6D2XXL0 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSPTRT00000098887.1 | CTCFL-206 | 1884 | 627aa | ENSPTRP00000065656.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RLY0 | - |
| ENSPTRT00000082733.1 | CTCFL-208 | 1722 | 573aa | ENSPTRP00000074495.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3SBR9 | - |
| ENSPTRT00000081059.1 | CTCFL-207 | 1452 | 483aa | ENSPTRP00000064531.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2I3RIQ3 | - |
