Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PLTP ENSPTRG00000013573

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Description

phospholipid transfer protein [Source:VGNC Symbol;Acc:VGNC:6245]

Location

Chromosome 20: 47,594,299-47,610,704 reverse strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000105897.1	PLTP-201	4550	500aa	ENSPTRP00000067809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RT48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000091966.1	PLTP-202	4475	475aa	ENSPTRP00000074349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBX8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000025267.6	PLTP-203	1458	485aa	ENSPTRP00000023319.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QKH6	-
ENSPTRT00000102355.1	PLTP-204	1326	441aa	ENSPTRP00000088408.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TGR0 A0A6D2XDD7	-
ENSPTRT00000081746.1	PLTP-205	1197	398aa	ENSPTRP00000079849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SSC0 A0A6D2Y6E0	-

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Summary

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