Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HNF4A ENSPTRG00000013519

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Description

hepatocyte nuclear factor 4 alpha [Source:VGNC Symbol;Acc:VGNC:14476]

Location

Chromosome 20: 45,996,710-46,084,651 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 5 transcripts (splice variants), 236 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000096740.1	HNF4A-203	4725	474aa	ENSPTRP00000087554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TE66 A0A6D2W5Q0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000082592.1	HNF4A-205	1362	453aa	ENSPTRP00000082592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T080	-
ENSPTRT00000082329.1	HNF4A-201	1359	452aa	ENSPTRP00000068875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RX32 A0A6D2XJR6	-
ENSPTRT00000095799.1	HNF4A-202	1350	449aa	ENSPTRP00000062586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RDX0 A0A6D2W616	-
ENSPTRT00000025158.6	HNF4A-204	1329	442aa	ENSPTRP00000023221.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QKE3	-

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Summary

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