Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: TOX2 ENSPTRG00000013512

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Description

TOX high mobility group box family member 2 [Source:VGNC Symbol;Acc:VGNC:6312]

Location

Chromosome 20: 45,557,737-45,714,038 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 4 transcripts (splice variants), 263 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000068149.3	TOX2-201	2488	506aa	ENSPTRP00000059746.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WGT0 H2RE21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000093547.1	TOX2-203	4290	464aa	ENSPTRP00000063834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8MKG4 A0A6D2WCW8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000099703.1	TOX2-202	4225	488aa	ENSPTRP00000064490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RJD8 A0A6D2Y341	-
ENSPTRT00000083208.1	TOX2-204	1077	358aa	ENSPTRP00000084024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T466	-

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Summary

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