Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: BPI ENSPTRG00000013485

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Description

bactericidal permeability increasing protein [Source:VGNC Symbol;Acc:VGNC:52083]

Location

Chromosome 20: 39,848,031-39,881,403 forward strand.

Pan_tro_3.0:CM000334.4

About this gene

This gene has 5 transcripts (splice variants), 122 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000025088.6	BPI-202	1470	489aa	ENSPTRP00000023152.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QKC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000078597.1	BPI-203	2197	240aa	ENSPTRP00000077250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G2HJM9	-
ENSPTRT00000106965.1	BPI-201	1901	487aa	ENSPTRP00000088950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TJ94 A0A6D2Y3R2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000097321.1	BPI-204	861	286aa	ENSPTRP00000077687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SKZ6 A0A6D2XKP6	-
ENSPTRT00000106269.1	BPI-205	840	279aa	ENSPTRP00000069818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RYL8	-

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Summary

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