Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRIP12 ENSPTRG00000013005

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Description

thyroid hormone receptor interactor 12 [Source:VGNC Symbol;Acc:VGNC:2894]

Location

Chromosome 2B: 120,831,701-120,992,659 reverse strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 8 transcripts (splice variants), 213 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000081744.1	TRIP12-201	9748	2068aa	ENSPTRP00000091338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TQY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000105193.1	TRIP12-202	9635	2040aa	ENSPTRP00000080143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SSX3 A0A6D2W9S6	-
ENSPTRT00000110985.1	TRIP12-203	9590	2025aa	ENSPTRP00000071176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2V5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000079190.1	TRIP12-204	6117	2038aa	ENSPTRP00000089023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TIG6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000095238.1	TRIP12-205	5937	1978aa	ENSPTRP00000075751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SGY1	-
ENSPTRT00000024112.6	TRIP12-206	5922	1973aa	ENSPTRP00000022237.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2QJK1	-
ENSPTRT00000105015.1	TRIP12-207	5169	1722aa	ENSPTRP00000090218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TLW1 A0A6D2XM36	-
ENSPTRT00000085964.1	TRIP12-208	1293	430aa	ENSPTRP00000086108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TA81 A0A6D2Y4R5	-

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Summary

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