Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ITGAV ENSPTRG00000012719

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Description

integrin subunit alpha V [Source:VGNC Symbol;Acc:VGNC:2706]

Location

Chromosome 2B: 77,098,067-77,190,641 forward strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 6 transcripts (splice variants), 243 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000056267.5	ITGAV-201	8278	1048aa	ENSPTRP00000048970.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XWV7 H2R6C3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000077360.1	ITGAV-202	3069	1022aa	ENSPTRP00000086460.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TC57	-
ENSPTRT00000077566.1	ITGAV-203	3066	1021aa	ENSPTRP00000078060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SM65	-
ENSPTRT00000082796.1	ITGAV-204	3039	1012aa	ENSPTRP00000091578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TQP4 A0A6D2WEZ7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000110172.1	ITGAV-205	3035	981aa	ENSPTRP00000071846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S4U1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000105310.1	ITGAV-206	3009	1002aa	ENSPTRP00000065253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RKR6 A0A6D2WZ46	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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