Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GPD2 ENSPTRG00000012549

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Description

glycerol-3-phosphate dehydrogenase 2 [Source:VGNC Symbol;Acc:VGNC:1947]

Location

Chromosome 2B: 46,312,789-46,490,703 forward strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 6 transcripts (splice variants), 244 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000099895.1	GPD2-204	2451	753aa	ENSPTRP00000074658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SC95	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPTRT00000046648.4	GPD2-201	6025	727aa	ENSPTRP00000044968.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WFP0 H2R361	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000107056.1	GPD2-202	3698	727aa	ENSPTRP00000085253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T8P8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000076493.1	GPD2-203	2255	748aa	ENSPTRP00000075521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SER9	-
ENSPTRT00000086127.1	GPD2-206	1140	379aa	ENSPTRP00000064135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RHJ9 A0A6D2WY85	-
ENSPTRT00000092151.1	GPD2-205	171	56aa	ENSPTRP00000066444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PPS4 A0A6D2YAK0	-

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Summary

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