Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TFCP2L1 ENSPTRG00000012415

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Description

transcription factor CP2 like 1 [Source:VGNC Symbol;Acc:VGNC:14440]

Location

Chromosome 2B: 7,671,829-7,732,348 reverse strand.

Pan_tro_3.0:CM000316.3

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000023046.5	TFCP2L1-201	1536	479aa	ENSPTRP00000021253.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XKK8 H2QIN0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000099129.1	TFCP2L1-202	1407	468aa	ENSPTRP00000071550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S3Z8	-
ENSPTRT00000076456.1	TFCP2L1-203	1377	458aa	ENSPTRP00000065028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RK45	-

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Summary

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