Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAX8 ENSPTRG00000012380

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Description

paired box 8 [Source:VGNC Symbol;Acc:VGNC:10736]

Location

Chromosome 2A: 111,274,454-111,335,270 reverse strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 6 transcripts (splice variants), 167 orthologues and 58 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000088229.1	PAX8-202	3984	456aa	ENSPTRP00000085551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8IVS0 A0A6D2XGB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000105829.1	PAX8-201	4102	85aa	ENSPTRP00000088618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3THC0 A0A6D2Y4J1	-
ENSPTRT00000022990.6	PAX8-203	1356	451aa	ENSPTRP00000051762.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2R8M9	-
ENSPTRT00000110024.1	PAX8-204	1164	387aa	ENSPTRP00000089552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TK05	-
ENSPTRT00000097207.1	PAX8-205	966	321aa	ENSPTRP00000092153.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TSF1 A0A6D2WAA2	-
ENSPTRT00000082671.1	PAX8-206	864	287aa	ENSPTRP00000078841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SQP1 A0A6D2VUE6	-

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Summary

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