Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: POLR1B ENSPTRG00000012366

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Description

RNA polymerase I subunit B [Source:VGNC Symbol;Acc:VGNC:375]

Location

Chromosome 2A: 110,651,189-110,687,617 forward strand.

Pan_tro_3.0:CM000315.3

About this gene

This gene has 5 transcripts (splice variants), 198 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000109057.1	POLR1B-201	6155	1135aa	ENSPTRP00000071178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S2L7 A0A6D2XGZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000022962.6	POLR1B-204	3240	1079aa	ENSPTRP00000051773.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WCS0 H2R8N5	-
ENSPTRT00000104388.1	POLR1B-205	2859	952aa	ENSPTRP00000088980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TJB9 A0A6D2Y600	-
ENSPTRT00000093078.1	POLR1B-203	321	106aa	ENSPTRP00000065970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RMN5	-
ENSPTRT00000079181.1	POLR1B-202	222	73aa	ENSPTRP00000093148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TVE6 A0A6D2WAJ7	-

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Summary

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